Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 AC004449.1-201ENST00000564240 433 ntBASIC16.35■□□□□ 0.21
CCL4P13236 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL4P13236 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.35■□□□□ 0.21
CCL4P13236 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL4P13236 REXO1L3P-201ENST00000622202 1288 ntBASIC16.35■□□□□ 0.21
CCL4P13236 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.35■□□□□ 0.21
CCL4P13236 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL4P13236 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.35■□□□□ 0.21
CCL4P13236 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL4P13236 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL4P13236 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL4P13236 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCL4P13236 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL4P13236 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.34■□□□□ 0.21
CCL4P13236 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL4P13236 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCL4P13236 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCL4P13236 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.33■□□□□ 0.21
CCL4P13236 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.33■□□□□ 0.21
CCL4P13236 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CCL4P13236 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCL4P13236 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL4P13236 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 MIR770-201ENST00000390219 98 ntBASIC16.33■□□□□ 0.2
CCL4P13236 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL4P13236 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.33■□□□□ 0.2
CCL4P13236 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL4P13236 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL4P13236 MIR3197-201ENST00000582241 73 ntBASIC16.33■□□□□ 0.2
CCL4P13236 AC022145.2-201ENST00000598203 171 ntBASIC16.33■□□□□ 0.2
CCL4P13236 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL4P13236 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL4P13236 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.33■□□□□ 0.2
CCL4P13236 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.33■□□□□ 0.2
CCL4P13236 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL4P13236 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CCL4P13236 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.33■□□□□ 0.2
CCL4P13236 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCL4P13236 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CCL4P13236 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCL4P13236 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.32■□□□□ 0.2
CCL4P13236 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL4P13236 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCL4P13236 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCL4P13236 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCL4P13236 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms