Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TOP2AP11388 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC30.1■■■□□ 2.41
TOP2AP11388 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TOP2AP11388 TERF1P3-201ENST00000505638 1227 ntBASIC30.1■■■□□ 2.41
TOP2AP11388 AP000842.3-202ENST00000569238 1080 ntBASIC30.1■■■□□ 2.41
TOP2AP11388 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC30.1■■■□□ 2.41
TOP2AP11388 AC008761.3-201ENST00000624803 892 ntBASIC30.1■■■□□ 2.41
TOP2AP11388 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
TOP2AP11388 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TOP2AP11388 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC30.1■■■□□ 2.41
TOP2AP11388 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC30.1■■■□□ 2.41
TOP2AP11388 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC30.1■■■□□ 2.41
TOP2AP11388 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
TOP2AP11388 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC30.1■■■□□ 2.41
TOP2AP11388 AC012569.1-201ENST00000591191 1524 ntBASIC30.09■■■□□ 2.41
TOP2AP11388 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
TOP2AP11388 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
TOP2AP11388 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC30.09■■■□□ 2.41
TOP2AP11388 GSAP-205ENST00000430584 600 ntTSL 5 BASIC30.09■■■□□ 2.41
TOP2AP11388 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC30.09■■■□□ 2.41
TOP2AP11388 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
TOP2AP11388 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TOP2AP11388 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TOP2AP11388 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
TOP2AP11388 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC30.08■■■□□ 2.41
TOP2AP11388 RAC2-204ENST00000406508 893 ntTSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 MRPS18AP1-201ENST00000414458 589 ntBASIC30.08■■■□□ 2.41
TOP2AP11388 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC30.08■■■□□ 2.41
TOP2AP11388 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC30.08■■■□□ 2.41
TOP2AP11388 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC30.08■■■□□ 2.41
TOP2AP11388 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
TOP2AP11388 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
TOP2AP11388 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
TOP2AP11388 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC30.07■■■□□ 2.4
TOP2AP11388 AC091167.2-201ENST00000579581 588 ntBASIC30.07■■■□□ 2.4
TOP2AP11388 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC30.07■■■□□ 2.4
TOP2AP11388 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC30.07■■■□□ 2.4
TOP2AP11388 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC30.07■■■□□ 2.4
TOP2AP11388 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TOP2AP11388 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TOP2AP11388 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 SPDYE7P-202ENST00000420373 878 ntBASIC30.06■■■□□ 2.4
TOP2AP11388 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 TSPY16P-201ENST00000449843 468 ntBASIC30.06■■■□□ 2.4
TOP2AP11388 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC30.06■■■□□ 2.4
TOP2AP11388 ALG1L8P-201ENST00000533887 760 ntBASIC30.06■■■□□ 2.4
TOP2AP11388 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
TOP2AP11388 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC30.06■■■□□ 2.4
TOP2AP11388 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
TOP2AP11388 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 PODN-203ENST00000395871 2744 ntTSL 5 BASIC30.06■■■□□ 2.4
TOP2AP11388 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC30.06■■■□□ 2.4
TOP2AP11388 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC30.06■■■□□ 2.4
TOP2AP11388 OARD1-208ENST00000469104 704 ntTSL 2 BASIC30.06■■■□□ 2.4
TOP2AP11388 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC30.06■■■□□ 2.4
TOP2AP11388 AC069120.2-201ENST00000524091 540 ntBASIC30.06■■■□□ 2.4
TOP2AP11388 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TOP2AP11388 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC30.06■■■□□ 2.4
TOP2AP11388 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC30.06■■■□□ 2.4
TOP2AP11388 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
TOP2AP11388 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
TOP2AP11388 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC30.05■■■□□ 2.4
TOP2AP11388 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms