Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.42■□□□□ 0.7
RARBP10826 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARBP10826 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARBP10826 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARBP10826 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.42■□□□□ 0.7
RARBP10826 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RARBP10826 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.42■□□□□ 0.7
RARBP10826 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RARBP10826 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 WIZP1-201ENST00000531444 2299 ntBASIC19.41■□□□□ 0.7
RARBP10826 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.41■□□□□ 0.7
RARBP10826 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RARBP10826 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.41■□□□□ 0.7
RARBP10826 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 AC239800.4-201ENST00000603712 296 ntBASIC19.41■□□□□ 0.7
RARBP10826 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RARBP10826 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RARBP10826 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RARBP10826 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.41■□□□□ 0.7
RARBP10826 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RARBP10826 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.41■□□□□ 0.7
RARBP10826 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 AC138932.1-201ENST00000534164 6830 ntBASIC19.4■□□□□ 0.7
RARBP10826 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RARBP10826 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.4■□□□□ 0.7
RARBP10826 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RARBP10826 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.4■□□□□ 0.7
RARBP10826 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RARBP10826 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.4■□□□□ 0.7
RARBP10826 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.4■□□□□ 0.7
RARBP10826 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.4■□□□□ 0.7
RARBP10826 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.4■□□□□ 0.7
RARBP10826 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 ACTL9-202ENST00000612068 1252 ntBASIC19.4■□□□□ 0.7
RARBP10826 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.4■□□□□ 0.7
RARBP10826 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.4■□□□□ 0.7
RARBP10826 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RARBP10826 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RARBP10826 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RARBP10826 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
RARBP10826 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
RARBP10826 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RARBP10826 AC002056.1-201ENST00000395613 760 ntBASIC19.39■□□□□ 0.69
RARBP10826 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 TIMM8BP1-201ENST00000452384 211 ntBASIC19.39■□□□□ 0.69
RARBP10826 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RARBP10826 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.39■□□□□ 0.69
RARBP10826 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.39■□□□□ 0.69
RARBP10826 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.39■□□□□ 0.69
RARBP10826 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.39■□□□□ 0.69
RARBP10826 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.39■□□□□ 0.69
RARBP10826 AC005498.2-205ENST00000593218 784 ntBASIC19.39■□□□□ 0.69
RARBP10826 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.39■□□□□ 0.69
RARBP10826 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RARBP10826 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.39■□□□□ 0.69
RARBP10826 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.39■□□□□ 0.69
RARBP10826 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RARBP10826 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms