Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 IGHV3-52-201ENST00000519770 353 ntBASIC18.87■□□□□ 0.61
CCDC172P0C7W6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AC022616.7-201ENST00000525383 220 ntBASIC18.87■□□□□ 0.61
CCDC172P0C7W6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC172P0C7W6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 AC090616.6-201ENST00000582640 721 ntBASIC18.86■□□□□ 0.61
CCDC172P0C7W6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 AC083849.1-201ENST00000615227 514 ntBASIC18.86■□□□□ 0.61
CCDC172P0C7W6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC172P0C7W6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 AC103702.1-201ENST00000548801 2630 ntBASIC18.85■□□□□ 0.61
CCDC172P0C7W6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC172P0C7W6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 AD000864.1-201ENST00000624076 2295 ntBASIC18.84■□□□□ 0.61
CCDC172P0C7W6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 TSPY22P-201ENST00000427496 604 ntBASIC18.84■□□□□ 0.61
CCDC172P0C7W6 SPDYE13P-201ENST00000445314 798 ntBASIC18.84■□□□□ 0.61
CCDC172P0C7W6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 AC010460.3-201ENST00000511359 1579 ntBASIC18.84■□□□□ 0.61
CCDC172P0C7W6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC172P0C7W6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC172P0C7W6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms