Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.18■□□□□ 0.34
CAPN1P07384 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.18■□□□□ 0.34
CAPN1P07384 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 FAAHP1-202ENST00000446499 1238 ntBASIC17.18■□□□□ 0.34
CAPN1P07384 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.18■□□□□ 0.34
CAPN1P07384 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.18■□□□□ 0.34
CAPN1P07384 Z69720.1-201ENST00000601483 472 ntBASIC17.18■□□□□ 0.34
CAPN1P07384 AL353801.3-201ENST00000609898 542 ntBASIC17.18■□□□□ 0.34
CAPN1P07384 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.18■□□□□ 0.34
CAPN1P07384 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CAPN1P07384 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CAPN1P07384 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CAPN1P07384 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CAPN1P07384 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
CAPN1P07384 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.17■□□□□ 0.34
CAPN1P07384 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.17■□□□□ 0.34
CAPN1P07384 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.17■□□□□ 0.34
CAPN1P07384 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.17■□□□□ 0.34
CAPN1P07384 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.17■□□□□ 0.34
CAPN1P07384 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 AC009053.2-201ENST00000563701 2365 ntBASIC17.17■□□□□ 0.34
CAPN1P07384 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.17■□□□□ 0.34
CAPN1P07384 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.17■□□□□ 0.34
CAPN1P07384 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CAPN1P07384 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CAPN1P07384 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.16■□□□□ 0.34
CAPN1P07384 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.16■□□□□ 0.34
CAPN1P07384 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 AC099336.1-202ENST00000602961 463 ntBASIC17.16■□□□□ 0.34
CAPN1P07384 AC104692.2-201ENST00000603054 253 ntBASIC17.16■□□□□ 0.34
CAPN1P07384 AC138894.3-201ENST00000603787 634 ntBASIC17.16■□□□□ 0.34
CAPN1P07384 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CAPN1P07384 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CAPN1P07384 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CAPN1P07384 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CAPN1P07384 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.16■□□□□ 0.34
CAPN1P07384 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.16■□□□□ 0.34
CAPN1P07384 AL139384.1-201ENST00000612143 3047 ntBASIC17.15■□□□□ 0.34
CAPN1P07384 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.15■□□□□ 0.34
CAPN1P07384 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CAPN1P07384 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms