Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 RPS8P6-201ENST00000426177 609 ntBASIC19.03■□□□□ 0.64
VTNP04004 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.03■□□□□ 0.64
VTNP04004 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 AC010507.1-201ENST00000633895 436 ntBASIC19.03■□□□□ 0.64
VTNP04004 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
VTNP04004 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 AC002310.6-201ENST00000624451 1377 ntBASIC19.03■□□□□ 0.64
VTNP04004 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.03■□□□□ 0.64
VTNP04004 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
VTNP04004 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VTNP04004 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.02■□□□□ 0.64
VTNP04004 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VTNP04004 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.02■□□□□ 0.64
VTNP04004 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
VTNP04004 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VTNP04004 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 AC092183.1-201ENST00000469884 875 ntBASIC19.02■□□□□ 0.64
VTNP04004 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.02■□□□□ 0.64
VTNP04004 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.02■□□□□ 0.64
VTNP04004 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
VTNP04004 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.02■□□□□ 0.64
VTNP04004 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.02■□□□□ 0.64
VTNP04004 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.02■□□□□ 0.64
VTNP04004 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.02■□□□□ 0.64
VTNP04004 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VTNP04004 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.02■□□□□ 0.63
VTNP04004 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VTNP04004 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VTNP04004 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
VTNP04004 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
VTNP04004 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 AC138932.1-201ENST00000534164 6830 ntBASIC19.01■□□□□ 0.63
VTNP04004 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.01■□□□□ 0.63
VTNP04004 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VTNP04004 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.01■□□□□ 0.63
VTNP04004 BCL2-203ENST00000589955 5011 ntBASIC19.01■□□□□ 0.63
VTNP04004 HCG11-201ENST00000411553 5696 ntBASIC19.01■□□□□ 0.63
VTNP04004 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.01■□□□□ 0.63
VTNP04004 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.01■□□□□ 0.63
VTNP04004 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.01■□□□□ 0.63
VTNP04004 MCCD1P2-201ENST00000423228 335 ntBASIC19.01■□□□□ 0.63
VTNP04004 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VTNP04004 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VTNP04004 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VTNP04004 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VTNP04004 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19■□□□□ 0.63
VTNP04004 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VTNP04004 COA5-202ENST00000409997 557 ntTSL 4 BASIC19■□□□□ 0.63
VTNP04004 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19■□□□□ 0.63
VTNP04004 SLC25A6P5-201ENST00000435663 894 ntBASIC19■□□□□ 0.63
VTNP04004 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19■□□□□ 0.63
VTNP04004 ALG1L5P-201ENST00000482043 771 ntBASIC19■□□□□ 0.63
VTNP04004 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19■□□□□ 0.63
VTNP04004 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19■□□□□ 0.63
VTNP04004 CD63-210ENST00000550776 870 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19■□□□□ 0.63
VTNP04004 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms