Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-ND3P03897 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND3P03897 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
MT-ND3P03897 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-ND3P03897 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 HBZP1-201ENST00000354915 429 ntBASIC17.77■□□□□ 0.44
MT-ND3P03897 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.77■□□□□ 0.44
MT-ND3P03897 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.77■□□□□ 0.44
MT-ND3P03897 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.77■□□□□ 0.44
MT-ND3P03897 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MT-ND3P03897 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MT-ND3P03897 AC016396.2-201ENST00000562575 1417 ntBASIC17.77■□□□□ 0.44
MT-ND3P03897 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
MT-ND3P03897 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
MT-ND3P03897 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.77■□□□□ 0.43
MT-ND3P03897 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.77■□□□□ 0.43
MT-ND3P03897 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.77■□□□□ 0.43
MT-ND3P03897 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MT-ND3P03897 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.76■□□□□ 0.43
MT-ND3P03897 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.76■□□□□ 0.43
MT-ND3P03897 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.76■□□□□ 0.43
MT-ND3P03897 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 KRT126P-201ENST00000549467 1181 ntBASIC17.76■□□□□ 0.43
MT-ND3P03897 MIR3917-201ENST00000580971 93 ntBASIC17.76■□□□□ 0.43
MT-ND3P03897 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.76■□□□□ 0.43
MT-ND3P03897 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
MT-ND3P03897 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MT-ND3P03897 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
MT-ND3P03897 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MT-ND3P03897 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-ND3P03897 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
MT-ND3P03897 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND3P03897 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.75■□□□□ 0.43
MT-ND3P03897 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
MT-ND3P03897 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MT-ND3P03897 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MT-ND3P03897 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND3P03897 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MT-ND3P03897 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.75■□□□□ 0.43
MT-ND3P03897 PVRIG2P-201ENST00000435460 978 ntBASIC17.75■□□□□ 0.43
MT-ND3P03897 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms