Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
UPK1BO75841 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 RARRES2P10-201ENST00000564312 460 ntBASIC15.18■□□□□ 0.02
UPK1BO75841 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.18■□□□□ 0.02
UPK1BO75841 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
UPK1BO75841 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.18■□□□□ 0.02
UPK1BO75841 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
UPK1BO75841 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1BO75841 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1BO75841 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.17■□□□□ 0.02
UPK1BO75841 MCCD1P1-208ENST00000445732 328 ntBASIC15.17■□□□□ 0.02
UPK1BO75841 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.17■□□□□ 0.02
UPK1BO75841 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1BO75841 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UPK1BO75841 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UPK1BO75841 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.17■□□□□ 0.02
UPK1BO75841 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.17■□□□□ 0.02
UPK1BO75841 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
UPK1BO75841 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 ALOX12P2-203ENST00000570921 1945 ntBASIC15.16■□□□□ 0.02
UPK1BO75841 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
UPK1BO75841 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK1BO75841 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UPK1BO75841 AL023284.2-201ENST00000405850 579 ntBASIC15.16■□□□□ 0.02
UPK1BO75841 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.16■□□□□ 0.02
UPK1BO75841 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.16■□□□□ 0.02
UPK1BO75841 AC124947.2-201ENST00000547118 1133 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms