Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 AL662844.4-201ENST00000606367 2838 ntBASIC17.11■□□□□ 0.33
ITM2AO43736 AC010460.3-201ENST00000511359 1579 ntBASIC17.11■□□□□ 0.33
ITM2AO43736 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 AC006449.5-201ENST00000610658 2098 ntBASIC17.1■□□□□ 0.33
ITM2AO43736 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
ITM2AO43736 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ITM2AO43736 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 HLA-F-220ENST00000434407 884 ntBASIC17.1■□□□□ 0.33
ITM2AO43736 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 AC002558.1-201ENST00000488906 803 ntBASIC17.1■□□□□ 0.33
ITM2AO43736 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.1■□□□□ 0.33
ITM2AO43736 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ITM2AO43736 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ITM2AO43736 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
ITM2AO43736 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITM2AO43736 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITM2AO43736 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 AL513477.1-201ENST00000602865 2407 ntBASIC17.09■□□□□ 0.33
ITM2AO43736 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ITM2AO43736 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.09■□□□□ 0.33
ITM2AO43736 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.09■□□□□ 0.33
ITM2AO43736 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ITM2AO43736 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ITM2AO43736 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITM2AO43736 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2AO43736 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2AO43736 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ITM2AO43736 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2AO43736 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITM2AO43736 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms