Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.51■□□□□ 0.71
MSH4O15457 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MSH4O15457 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MSH4O15457 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MSH4O15457 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MSH4O15457 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MSH4O15457 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MSH4O15457 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MSH4O15457 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
MSH4O15457 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.5■□□□□ 0.71
MSH4O15457 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
MSH4O15457 AL022342.1-201ENST00000400363 863 ntBASIC19.5■□□□□ 0.71
MSH4O15457 PTCHD3P3-201ENST00000403073 906 ntBASIC19.5■□□□□ 0.71
MSH4O15457 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.5■□□□□ 0.71
MSH4O15457 RPL13AP23-201ENST00000480739 586 ntBASIC19.5■□□□□ 0.71
MSH4O15457 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 RNA5SP415-201ENST00000517246 115 ntBASIC19.5■□□□□ 0.71
MSH4O15457 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
MSH4O15457 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.5■□□□□ 0.71
MSH4O15457 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MSH4O15457 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.5■□□□□ 0.71
MSH4O15457 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MSH4O15457 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
MSH4O15457 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
MSH4O15457 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 UNC93B6-202ENST00000528242 690 ntBASIC19.49■□□□□ 0.71
MSH4O15457 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.49■□□□□ 0.71
MSH4O15457 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.49■□□□□ 0.71
MSH4O15457 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 AF228730.7-201ENST00000641842 219 ntBASIC19.49■□□□□ 0.71
MSH4O15457 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.49■□□□□ 0.71
MSH4O15457 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.49■□□□□ 0.71
MSH4O15457 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
MSH4O15457 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
MSH4O15457 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.49■□□□□ 0.71
MSH4O15457 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.48■□□□□ 0.71
MSH4O15457 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.48■□□□□ 0.71
MSH4O15457 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.48■□□□□ 0.71
MSH4O15457 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.48■□□□□ 0.71
MSH4O15457 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MSH4O15457 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.48■□□□□ 0.71
MSH4O15457 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MSH4O15457 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.48■□□□□ 0.71
MSH4O15457 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.48■□□□□ 0.71
MSH4O15457 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MSH4O15457 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.48■□□□□ 0.71
MSH4O15457 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.48■□□□□ 0.71
MSH4O15457 RPS15P9-201ENST00000494093 319 ntBASIC19.48■□□□□ 0.71
MSH4O15457 AC145285.3-201ENST00000564603 959 ntBASIC19.48■□□□□ 0.71
MSH4O15457 AC005593.1-201ENST00000624894 515 ntBASIC19.48■□□□□ 0.71
MSH4O15457 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
MSH4O15457 AC116353.5-201ENST00000638148 1699 ntBASIC19.48■□□□□ 0.71
MSH4O15457 AC141586.5-201ENST00000624546 2050 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms