Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRANK1O15050 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.07■□□□□ 0.48
TRANK1O15050 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
TRANK1O15050 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 AL512384.1-201ENST00000406683 331 ntBASIC18.07■□□□□ 0.48
TRANK1O15050 AL512638.1-201ENST00000457493 794 ntBASIC18.07■□□□□ 0.48
TRANK1O15050 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.07■□□□□ 0.48
TRANK1O15050 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TRANK1O15050 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.07■□□□□ 0.48
TRANK1O15050 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.07■□□□□ 0.48
TRANK1O15050 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRANK1O15050 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
TRANK1O15050 AC046185.3-201ENST00000623228 1824 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.06■□□□□ 0.48
TRANK1O15050 IGHV3-52-201ENST00000519770 353 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.06■□□□□ 0.48
TRANK1O15050 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
TRANK1O15050 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.06■□□□□ 0.48
TRANK1O15050 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 IGHV3-42-201ENST00000520410 361 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.06■□□□□ 0.48
TRANK1O15050 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 AC138969.3-201ENST00000546612 1459 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 AC138932.2-201ENST00000548268 1459 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 AC126755.4-201ENST00000549796 1459 ntBASIC18.06■□□□□ 0.48
TRANK1O15050 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRANK1O15050 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRANK1O15050 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRANK1O15050 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 AC241585.1-201ENST00000433527 519 ntBASIC18.05■□□□□ 0.48
TRANK1O15050 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.05■□□□□ 0.48
TRANK1O15050 TP53TG3HP-202ENST00000569755 579 ntBASIC18.05■□□□□ 0.48
TRANK1O15050 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.05■□□□□ 0.48
TRANK1O15050 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 SPTSSB-204ENST00000617024 1292 ntBASIC18.05■□□□□ 0.48
TRANK1O15050 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.05■□□□□ 0.48
TRANK1O15050 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.05■□□□□ 0.48
TRANK1O15050 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRANK1O15050 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRANK1O15050 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRANK1O15050 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRANK1O15050 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRANK1O15050 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.04■□□□□ 0.48
TRANK1O15050 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.04■□□□□ 0.48
TRANK1O15050 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRANK1O15050 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms