Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM38O00635 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM38O00635 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM38O00635 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM38O00635 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM38O00635 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM38O00635 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 AP005117.1-201ENST00000584346 1413 ntBASIC17.55■□□□□ 0.4
TRIM38O00635 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM38O00635 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM38O00635 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 PKD1P1-201ENST00000458669 6805 ntBASIC17.54■□□□□ 0.4
TRIM38O00635 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 AC092865.5-201ENST00000545435 363 ntBASIC17.54■□□□□ 0.4
TRIM38O00635 SART3-203ENST00000546611 1184 ntBASIC17.54■□□□□ 0.4
TRIM38O00635 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM38O00635 AC021087.4-201ENST00000563761 564 ntBASIC17.54■□□□□ 0.4
TRIM38O00635 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM38O00635 TERC-201ENST00000602385 541 ntBASIC17.54■□□□□ 0.4
TRIM38O00635 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM38O00635 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TRIM38O00635 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM38O00635 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRIM38O00635 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TRIM38O00635 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM38O00635 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 PMS2P7-201ENST00000506558 1336 ntBASIC17.53■□□□□ 0.4
TRIM38O00635 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM38O00635 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM38O00635 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM38O00635 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM38O00635 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM38O00635 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms