Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR4O00206 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 MCCD1P2-201ENST00000423228 335 ntBASIC17.25■□□□□ 0.35
TLR4O00206 PRSS29P-201ENST00000440800 595 ntBASIC17.25■□□□□ 0.35
TLR4O00206 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.25■□□□□ 0.35
TLR4O00206 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR4O00206 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.25■□□□□ 0.35
TLR4O00206 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.25■□□□□ 0.35
TLR4O00206 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TLR4O00206 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TLR4O00206 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TLR4O00206 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.25■□□□□ 0.35
TLR4O00206 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.24■□□□□ 0.35
TLR4O00206 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
TLR4O00206 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 AC211486.1-202ENST00000416371 468 ntBASIC17.24■□□□□ 0.35
TLR4O00206 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR4O00206 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR4O00206 AC211476.1-201ENST00000503899 468 ntBASIC17.24■□□□□ 0.35
TLR4O00206 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR4O00206 AC004790.2-201ENST00000623588 572 ntBASIC17.24■□□□□ 0.35
TLR4O00206 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TLR4O00206 AC002310.6-201ENST00000624451 1377 ntBASIC17.24■□□□□ 0.35
TLR4O00206 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.24■□□□□ 0.35
TLR4O00206 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TLR4O00206 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR4O00206 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TLR4O00206 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR4O00206 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR4O00206 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TLR4O00206 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 AC005829.1-201ENST00000570002 483 ntBASIC17.23■□□□□ 0.35
TLR4O00206 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR4O00206 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR4O00206 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms