Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LYRM9A8MSI8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LYRM9A8MSI8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 RPS2P28-201ENST00000314255 741 ntBASIC12.43□□□□□ -0.42
LYRM9A8MSI8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 AF186996.4-201ENST00000467186 377 ntBASIC12.43□□□□□ -0.42
LYRM9A8MSI8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 NKAPP1-205ENST00000585790 367 ntBASIC12.43□□□□□ -0.42
LYRM9A8MSI8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LYRM9A8MSI8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AL589182.2-201ENST00000619332 1049 ntBASIC12.42□□□□□ -0.42
LYRM9A8MSI8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 NCF1C-201ENST00000438382 1427 ntBASIC12.42□□□□□ -0.42
LYRM9A8MSI8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LYRM9A8MSI8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LYRM9A8MSI8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.41□□□□□ -0.42
LYRM9A8MSI8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LYRM9A8MSI8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LYRM9A8MSI8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms