Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.03□□□□□ -0.32
SMIM27A0A1W2PRY6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM27A0A1W2PRY6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 SLC29A4P1-201ENST00000398760 971 ntBASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
SMIM27A0A1W2PRY6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 MIR4674-201ENST00000582457 87 ntBASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 AP000692.2-201ENST00000608391 879 ntBASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 AC080038.1-201ENST00000611274 1154 ntBASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 KRT8P47-201ENST00000604727 1398 ntBASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM27A0A1W2PRY6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SMIM27A0A1W2PRY6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms