Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LINC01558Q9Y6Z2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 AC067750.1-201ENST00000608826 6545 ntBASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 AC006455.2-201ENST00000429931 906 ntBASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 RPS2P35-201ENST00000443417 897 ntBASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 RCC2P6-201ENST00000526625 1557 ntBASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LINC01558Q9Y6Z2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 AC087633.2-202ENST00000565166 1439 ntBASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC8.98□□□□□ -0.97
LINC01558Q9Y6Z2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms