Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 KRT18P13-201ENST00000400056 1290 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 HNRNPDP1-201ENST00000439535 754 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 RPL13AP23-201ENST00000480739 586 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 AC112698.1-201ENST00000510299 916 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 AL049840.3-201ENST00000602669 611 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 AC141586.5-201ENST00000624546 2050 ntBASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHGA6Q9Y5G7 AC124067.4-201ENST00000519691 2379 ntBASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 AC006116.8-202ENST00000587620 1550 ntBASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 ZNF259P1-201ENST00000407656 1365 ntBASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 AC084018.2-201ENST00000613093 2607 ntBASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGA6Q9Y5G7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AC021087.4-201ENST00000563761 564 ntBASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AC139530.3-201ENST00000620344 690 ntBASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AL139288.1-201ENST00000623748 933 ntBASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AC116407.3-201ENST00000623905 1129 ntBASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA6Q9Y5G7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms