Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 C1QL1P1-201ENST00000568105 661 ntBASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 AL109659.2-201ENST00000606809 1674 ntBASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 LINC00304-203ENST00000565008 1864 ntBASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CHTOPQ9Y3Y2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 BX276092.2-201ENST00000417668 665 ntBASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC026691.1-201ENST00000602502 2017 ntBASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 AC099343.3-201ENST00000605834 2503 ntBASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHTOPQ9Y3Y2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms