Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 TMPOP1-202ENST00000424642 1267 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 AC024563.2-201ENST00000603282 481 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 AL136038.4-201ENST00000603606 1261 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 AC006011.2-201ENST00000621313 1158 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 AL391807.1-203ENST00000604392 2365 ntBASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HHLA3Q9XRX5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 RCN1P1-201ENST00000400413 996 ntBASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 AC104076.2-201ENST00000448912 469 ntBASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 RN7SL850P-201ENST00000579959 291 ntBASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HHLA3Q9XRX5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 KRT18P55-202ENST00000578578 1546 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 AL355312.1-201ENST00000407115 2176 ntBASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HHLA3Q9XRX5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms