Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 ESPNP-201ENST00000270691 2015 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 BX276092.7-203ENST00000637198 1536 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AC002558.1-201ENST00000488906 803 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 MBP-227ENST00000526111 581 ntTSL 4 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AC015967.2-201ENST00000624092 234 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AC006435.4-201ENST00000625037 234 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 AL356737.1-201ENST00000634391 234 ntBASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RIMBP3Q9UFD9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 MIR3909-201ENST00000579518 119 ntBASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 AC092667.1-201ENST00000434301 2586 ntBASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIMBP3Q9UFD9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 AL512361.1-201ENST00000554200 418 ntBASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 RNU1-129P-201ENST00000384064 167 ntBASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 AC123567.1-201ENST00000548294 1261 ntBASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 U1.21-201ENST00000580816 167 ntBASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 AL589739.1-201ENST00000607720 493 ntBASIC27.23■■□□□ 1.95
RIMBP3Q9UFD9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 AC012569.1-201ENST00000591191 1524 ntBASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 MTND6P24-201ENST00000440466 518 ntBASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 AC007551.1-201ENST00000457394 519 ntBASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 MIR4722-201ENST00000578292 60 ntBASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC27.22■■□□□ 1.95
RIMBP3Q9UFD9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms