Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 UNC93B6-202ENST00000528242 690 ntBASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 AC034105.1-201ENST00000563488 319 ntBASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMG20BQ9P0W2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 AC006504.4-201ENST00000592118 1568 ntBASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 PMS2P1-201ENST00000431037 1228 ntBASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMG20BQ9P0W2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ELK2BP-201ENST00000415014 1224 ntBASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 NCF1C-201ENST00000438382 1427 ntBASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
HMG20BQ9P0W2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 AC097637.2-201ENST00000624096 1997 ntBASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 Z83851.2-201ENST00000609564 659 ntBASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 AL138688.1-201ENST00000624851 1594 ntBASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMG20BQ9P0W2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms