Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 SLC25A1P3-201ENST00000395415 828 ntBASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 AL139424.1-201ENST00000607572 797 ntBASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 AC004706.3-202ENST00000621574 984 ntBASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM248Q9NWD8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 AL031284.1-201ENST00000419297 478 ntBASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 RNA5SP419-201ENST00000515908 135 ntBASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 FAM215A-202ENST00000632077 792 ntBASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM248Q9NWD8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM248Q9NWD8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.77■□□□□ 0.43
TMEM248Q9NWD8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.77■□□□□ 0.43
TMEM248Q9NWD8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM248Q9NWD8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM248Q9NWD8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AL023806.1-201ENST00000603994 1649 ntBASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC139713.2-201ENST00000641328 2723 ntBASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 RPS2P28-201ENST00000314255 741 ntBASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 FDX1P1-201ENST00000449115 551 ntBASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC006557.2-201ENST00000592985 1240 ntBASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM248Q9NWD8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 AC093525.9-201ENST00000624961 1746 ntBASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM248Q9NWD8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms