Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 BX005266.1-201ENST00000473402 457 ntBASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 NKAPP1-205ENST00000585790 367 ntBASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BLOC1S4Q9NUP1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 AC092053.1-201ENST00000605787 1936 ntBASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BLOC1S4Q9NUP1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 AC060834.1-201ENST00000443027 2032 ntBASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 PRYP5-201ENST00000451909 266 ntBASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 SART3-203ENST00000546611 1184 ntBASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 AC008608.2-201ENST00000606089 416 ntBASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
BLOC1S4Q9NUP1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 EGFEM1P-202ENST00000431685 1563 ntBASIC19.33■□□□□ 0.69
BLOC1S4Q9NUP1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 SAPCD2P3-201ENST00000455031 850 ntBASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 AL356309.3-201ENST00000624132 1934 ntBASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BLOC1S4Q9NUP1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BLOC1S4Q9NUP1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms