Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD248Q9HCU0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CD248Q9HCU0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 MIR5100-201ENST00000579544 119 ntBASIC18.37■□□□□ 0.53
CD248Q9HCU0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 AL671883.3-201ENST00000603274 991 ntBASIC18.37■□□□□ 0.53
CD248Q9HCU0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.37■□□□□ 0.53
CD248Q9HCU0 AC103702.1-201ENST00000548801 2630 ntBASIC18.37■□□□□ 0.53
CD248Q9HCU0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD248Q9HCU0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.37■□□□□ 0.53
CD248Q9HCU0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 MINOS1P3-201ENST00000457048 203 ntBASIC18.36■□□□□ 0.53
CD248Q9HCU0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AC114341.1-201ENST00000618070 349 ntBASIC18.36■□□□□ 0.53
CD248Q9HCU0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 AC008741.2-201ENST00000612792 3115 ntBASIC18.36■□□□□ 0.53
CD248Q9HCU0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CD248Q9HCU0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD248Q9HCU0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms