Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 AP002414.1-201ENST00000391405 1147 ntBASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CRNKL1Q9BZJ0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 AC007967.2-201ENST00000432613 625 ntBASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 KRT18P3-201ENST00000451602 1288 ntBASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 AL590787.1-201ENST00000568856 1315 ntBASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CRNKL1Q9BZJ0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.67■□□□□ 0.9
CRNKL1Q9BZJ0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 RNA5SP416-201ENST00000516838 111 ntBASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 PGAM5P1-201ENST00000518923 814 ntBASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 MIR4751-201ENST00000578027 74 ntBASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.66■□□□□ 0.9
CRNKL1Q9BZJ0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms