Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN18Q99952 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN18Q99952 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN18Q99952 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN18Q99952 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.8■□□□□ 0.76
PTPN18Q99952 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN18Q99952 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN18Q99952 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN18Q99952 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN18Q99952 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN18Q99952 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN18Q99952 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN18Q99952 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN18Q99952 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PTPN18Q99952 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTPN18Q99952 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.79■□□□□ 0.76
PTPN18Q99952 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPN18Q99952 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPN18Q99952 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN18Q99952 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.79■□□□□ 0.76
PTPN18Q99952 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTPN18Q99952 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN18Q99952 AL359881.2-201ENST00000602973 570 ntBASIC19.79■□□□□ 0.76
PTPN18Q99952 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN18Q99952 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN18Q99952 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN18Q99952 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPN18Q99952 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PTPN18Q99952 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN18Q99952 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTPN18Q99952 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN18Q99952 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPN18Q99952 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PTPN18Q99952 AL009183.1-201ENST00000603760 355 ntBASIC19.78■□□□□ 0.76
PTPN18Q99952 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN18Q99952 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTPN18Q99952 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN18Q99952 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN18Q99952 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN18Q99952 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN18Q99952 COX5BP8-201ENST00000416911 349 ntBASIC19.77■□□□□ 0.76
PTPN18Q99952 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN18Q99952 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN18Q99952 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
PTPN18Q99952 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPN18Q99952 MIR6080-201ENST00000617359 66 ntBASIC19.77■□□□□ 0.76
PTPN18Q99952 AL358472.5-202ENST00000641448 1267 ntBASIC19.77■□□□□ 0.76
PTPN18Q99952 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PTPN18Q99952 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN18Q99952 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPN18Q99952 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.77■□□□□ 0.75
PTPN18Q99952 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms