Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA3Q99618 GK-202ENST00000378941 458 ntTSL 3 BASIC17.99■□□□□ 0.47
CDCA3Q99618 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.99■□□□□ 0.47
CDCA3Q99618 IGHV3-42-201ENST00000520410 361 ntBASIC17.99■□□□□ 0.47
CDCA3Q99618 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.99■□□□□ 0.47
CDCA3Q99618 AC109635.5-201ENST00000533593 962 ntBASIC17.99■□□□□ 0.47
CDCA3Q99618 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.99■□□□□ 0.47
CDCA3Q99618 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 LINC02560-201ENST00000596379 459 ntBASIC17.99■□□□□ 0.47
CDCA3Q99618 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.99■□□□□ 0.47
CDCA3Q99618 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
CDCA3Q99618 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDCA3Q99618 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 UXT-AS1-201ENST00000590504 1525 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDCA3Q99618 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 HMGA1P7-201ENST00000406908 502 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 TREML5P-201ENST00000421694 576 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 SPDYE14P-201ENST00000442619 822 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 AL512638.1-201ENST00000457493 794 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.98■□□□□ 0.47
CDCA3Q99618 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDCA3Q99618 SLC25A39P2-201ENST00000537614 270 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CDCA3Q99618 AL009183.1-201ENST00000603760 355 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 AC073130.3-201ENST00000624389 2278 ntBASIC17.98■□□□□ 0.47
CDCA3Q99618 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.98■□□□□ 0.47
CDCA3Q99618 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CDCA3Q99618 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDCA3Q99618 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.97■□□□□ 0.47
CDCA3Q99618 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 MIR661-201ENST00000384842 89 ntBASIC17.97■□□□□ 0.47
CDCA3Q99618 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA3Q99618 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.97■□□□□ 0.47
CDCA3Q99618 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDCA3Q99618 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA3Q99618 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.97■□□□□ 0.47
CDCA3Q99618 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.97■□□□□ 0.47
CDCA3Q99618 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
CDCA3Q99618 AL390754.1-201ENST00000619088 582 ntBASIC17.97■□□□□ 0.47
CDCA3Q99618 AL358472.5-202ENST00000641448 1267 ntBASIC17.97■□□□□ 0.47
CDCA3Q99618 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDCA3Q99618 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms