Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 AC116407.2-201ENST00000613639 860 ntBASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 AC010654.1-201ENST00000615722 808 ntBASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC46A1Q96NT5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.64■□□□□ 0.26
SLC46A1Q96NT5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC46A1Q96NT5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC46A1Q96NT5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 NOC2LP1-202ENST00000452600 2235 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AC096734.2-201ENST00000562054 433 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 PDPK2P-202ENST00000562415 1191 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AL031432.2-201ENST00000566714 459 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AL928711.1-201ENST00000570165 459 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AC004877.2-201ENST00000623941 599 ntBASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC46A1Q96NT5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 AC003669.1-201ENST00000334569 611 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 MRPL20P1-201ENST00000400819 433 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 IGLL3P-201ENST00000412472 434 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 KLF4P1-201ENST00000412782 1185 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 AC106028.4-201ENST00000614509 607 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC46A1Q96NT5 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms