Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.67■□□□□ 0.74
FGD4Q96M96 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.67■□□□□ 0.74
FGD4Q96M96 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
FGD4Q96M96 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.67■□□□□ 0.74
FGD4Q96M96 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FGD4Q96M96 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
FGD4Q96M96 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FGD4Q96M96 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
FGD4Q96M96 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FGD4Q96M96 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FGD4Q96M96 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.67■□□□□ 0.74
FGD4Q96M96 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
FGD4Q96M96 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 PI4KAP1-204ENST00000612579 1703 ntBASIC19.66■□□□□ 0.74
FGD4Q96M96 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
FGD4Q96M96 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 RFPL4AP1-201ENST00000530883 850 ntBASIC19.66■□□□□ 0.74
FGD4Q96M96 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.66■□□□□ 0.74
FGD4Q96M96 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FGD4Q96M96 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
FGD4Q96M96 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.65■□□□□ 0.74
FGD4Q96M96 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FGD4Q96M96 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
FGD4Q96M96 FAM58CP-201ENST00000435741 640 ntBASIC19.65■□□□□ 0.74
FGD4Q96M96 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.65■□□□□ 0.74
FGD4Q96M96 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.65■□□□□ 0.74
FGD4Q96M96 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.65■□□□□ 0.74
FGD4Q96M96 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FGD4Q96M96 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FGD4Q96M96 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
FGD4Q96M96 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FGD4Q96M96 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FGD4Q96M96 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FGD4Q96M96 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
FGD4Q96M96 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FGD4Q96M96 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 PAWRP1-201ENST00000451083 565 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 AC074386.1-202ENST00000463561 864 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 CYMP-203ENST00000474680 1263 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.64■□□□□ 0.73
FGD4Q96M96 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.64■□□□□ 0.73
FGD4Q96M96 ACTL9-202ENST00000612068 1252 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 AC091812.2-201ENST00000619081 385 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 AC092902.6-201ENST00000641783 218 ntBASIC19.64■□□□□ 0.73
FGD4Q96M96 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FGD4Q96M96 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.64■□□□□ 0.73
FGD4Q96M96 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
FGD4Q96M96 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms