Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 IGLL3P-201ENST00000412472 434 ntBASIC17.45■□□□□ 0.38
SIPA1Q96FS4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ALG1L5P-201ENST00000482043 771 ntBASIC17.45■□□□□ 0.38
SIPA1Q96FS4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 MIR4469-201ENST00000583919 79 ntBASIC17.45■□□□□ 0.38
SIPA1Q96FS4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 AL596442.2-201ENST00000610240 980 ntBASIC17.45■□□□□ 0.38
SIPA1Q96FS4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 AC004408.2-201ENST00000623613 2777 ntBASIC17.45■□□□□ 0.38
SIPA1Q96FS4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SIPA1Q96FS4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 PI4KAP1-204ENST00000612579 1703 ntBASIC17.44■□□□□ 0.38
SIPA1Q96FS4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 YBX1P5-201ENST00000509441 847 ntBASIC17.44■□□□□ 0.38
SIPA1Q96FS4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 AC096734.2-201ENST00000562054 433 ntBASIC17.44■□□□□ 0.38
SIPA1Q96FS4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.44■□□□□ 0.38
SIPA1Q96FS4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 ACTG1P4-201ENST00000425123 1122 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 HTR5BP-201ENST00000430851 1154 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 SNHG9-202ENST00000564014 471 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 AC004877.2-201ENST00000623941 599 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 AC010507.1-201ENST00000633895 436 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 BCAR1-209ENST00000546196 1340 ntBASIC17.43■□□□□ 0.38
SIPA1Q96FS4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIPA1Q96FS4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.42■□□□□ 0.38
SIPA1Q96FS4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms