Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD4Q96DM1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD4Q96DM1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD4Q96DM1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD4Q96DM1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PGBD4Q96DM1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.87■□□□□ 0.61
PGBD4Q96DM1 AC023274.1-201ENST00000418278 595 ntBASIC18.87■□□□□ 0.61
PGBD4Q96DM1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 AC004790.2-201ENST00000623588 572 ntBASIC18.87■□□□□ 0.61
PGBD4Q96DM1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PGBD4Q96DM1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ABALON-201ENST00000629058 1903 ntBASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AP002414.1-201ENST00000391405 1147 ntBASIC18.86■□□□□ 0.61
PGBD4Q96DM1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AL691403.2-201ENST00000618460 490 ntBASIC18.86■□□□□ 0.61
PGBD4Q96DM1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PGBD4Q96DM1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 MRPL20P1-201ENST00000400819 433 ntBASIC18.85■□□□□ 0.61
PGBD4Q96DM1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.85■□□□□ 0.61
PGBD4Q96DM1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.85■□□□□ 0.61
PGBD4Q96DM1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 KRT18P2-201ENST00000447938 1258 ntBASIC18.85■□□□□ 0.61
PGBD4Q96DM1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.85■□□□□ 0.61
PGBD4Q96DM1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms