Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 AC124947.2-201ENST00000547118 1133 ntBASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
SLC44A1Q8WWI5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 AL390719.2-201ENST00000606993 987 ntBASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC44A1Q8WWI5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 AC092068.3-201ENST00000587894 2016 ntBASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 DOC2GP-204ENST00000639052 2548 ntBASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 AC087499.1-201ENST00000418141 1075 ntBASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 LIN28AP1-201ENST00000429574 405 ntBASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 AC005332.3-201ENST00000589904 676 ntBASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC44A1Q8WWI5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC44A1Q8WWI5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms