Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 SPDYE21P-201ENST00000413323 827 ntBASIC29.74■■■□□ 2.35
TRIM41Q8WV44 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 AC109462.3-201ENST00000573934 613 ntBASIC29.74■■■□□ 2.35
TRIM41Q8WV44 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 AC107918.4-202ENST00000641623 219 ntBASIC29.74■■■□□ 2.35
TRIM41Q8WV44 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 AL390961.4-201ENST00000623958 2535 ntBASIC29.74■■■□□ 2.35
TRIM41Q8WV44 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC29.74■■■□□ 2.35
TRIM41Q8WV44 PODN-203ENST00000395871 2744 ntTSL 5 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC29.73■■■□□ 2.35
TRIM41Q8WV44 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SIGLEC16-201ENST00000599858 1437 ntBASIC29.72■■■□□ 2.35
TRIM41Q8WV44 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 UGT1A2P-201ENST00000454886 866 ntBASIC29.72■■■□□ 2.35
TRIM41Q8WV44 IGHV3-71-201ENST00000523324 359 ntBASIC29.72■■■□□ 2.35
TRIM41Q8WV44 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 MTDHP4-201ENST00000600287 670 ntBASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 REXO1L11P-201ENST00000620964 1927 ntBASIC29.72■■■□□ 2.35
TRIM41Q8WV44 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC29.72■■■□□ 2.35
TRIM41Q8WV44 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 FUT8-AS1-201ENST00000621019 1521 ntBASIC29.71■■■□□ 2.35
TRIM41Q8WV44 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 NME2P1-201ENST00000426182 414 ntBASIC29.71■■■□□ 2.35
TRIM41Q8WV44 NKTR-203ENST00000442970 646 ntTSL 2 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 AC148477.5-201ENST00000625164 1645 ntBASIC29.71■■■□□ 2.35
TRIM41Q8WV44 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TRIM41Q8WV44 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 AL132655.2-201ENST00000596276 594 ntBASIC29.7■■■□□ 2.35
TRIM41Q8WV44 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC29.7■■■□□ 2.35
TRIM41Q8WV44 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
TRIM41Q8WV44 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
TRIM41Q8WV44 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC29.7■■■□□ 2.34
TRIM41Q8WV44 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 GPR89P-201ENST00000407924 1495 ntBASIC29.69■■■□□ 2.34
TRIM41Q8WV44 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
TRIM41Q8WV44 AC018845.2-201ENST00000568326 409 ntBASIC29.69■■■□□ 2.34
TRIM41Q8WV44 LINC02560-201ENST00000596379 459 ntBASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms