Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AC132872.4-202ENST00000622924 2756 ntBASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AC066615.1-201ENST00000640911 628 ntBASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 AL662844.4-201ENST00000606367 2838 ntBASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 LINC00554-201ENST00000564841 3011 ntBASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFWD2Q8NHY2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 LINC02012-201ENST00000608206 1725 ntBASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 KRT17P2-201ENST00000300992 1314 ntBASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 UNC93B2-201ENST00000285383 730 ntBASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RFWD2Q8NHY2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 LINC01311-201ENST00000565162 1445 ntBASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
RFWD2Q8NHY2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 AL390955.1-201ENST00000428694 934 ntBASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 RBM17P1-201ENST00000453646 1190 ntBASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 AL353719.1-201ENST00000566847 864 ntBASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 MIR4497-201ENST00000583208 89 ntBASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 AP000525.1-201ENST00000608286 694 ntBASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD2Q8NHY2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms