Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 MIR3180-4-201ENST00000582223 153 ntBASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AC132938.6-201ENST00000623828 1655 ntBASIC15.11■□□□□ 0.01
BEST4Q8NFU0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AC092171.3-201ENST00000610122 2651 ntBASIC15.11■□□□□ 0.01
BEST4Q8NFU0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 AC022898.2-201ENST00000616822 1312 ntBASIC15.11■□□□□ 0.01
BEST4Q8NFU0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BEST4Q8NFU0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AL135905.2-201ENST00000584934 1404 ntBASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 CRYGFP-201ENST00000418459 633 ntBASIC15.1■□□□□ 0.01
BEST4Q8NFU0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AC104390.1-201ENST00000555663 520 ntBASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 HLA-J-201ENST00000462773 1622 ntBASIC15.1■□□□□ 0.01
BEST4Q8NFU0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.1■□□□□ 0.01
BEST4Q8NFU0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.09■□□□□ 0.01
BEST4Q8NFU0 NUDT16P1-203ENST00000513809 620 ntBASIC15.09■□□□□ 0.01
BEST4Q8NFU0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms