Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRFBP1Q8NEF9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ABCD1P5-201ENST00000445663 754 ntBASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 FOSL1P1-201ENST00000511041 816 ntBASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 PRELID1P1-202ENST00000567272 903 ntBASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 AC073592.5-201ENST00000624854 528 ntBASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SRFBP1Q8NEF9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
SRFBP1Q8NEF9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SRFBP1Q8NEF9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SRFBP1Q8NEF9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.26
SRFBP1Q8NEF9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 AL023806.1-201ENST00000603994 1649 ntBASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 KLF4P1-201ENST00000412782 1185 ntBASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 PMPCAP1-201ENST00000508114 1576 ntBASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRFBP1Q8NEF9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 AC046185.3-201ENST00000623228 1824 ntBASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRFBP1Q8NEF9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms