Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZNF248Q8NDW4 NEFHP1-201ENST00000412845 2629 ntBASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 TSEN15P1-201ENST00000423257 515 ntBASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 AC103564.2-201ENST00000432853 1299 ntBASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ZNF248Q8NDW4 NFIC-211ENST00000641145 8399 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ELK2BP-201ENST00000415014 1224 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AP000344.2-201ENST00000512987 629 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AL096865.1-201ENST00000606796 927 ntBASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF248Q8NDW4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF248Q8NDW4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
ZNF248Q8NDW4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF248Q8NDW4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF248Q8NDW4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 AL020989.1-201ENST00000422979 469 ntBASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 AC092474.2-201ENST00000424288 719 ntBASIC16.64■□□□□ 0.25
ZNF248Q8NDW4 IGHV3-65-201ENST00000523210 341 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms