Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 FER1L4-210ENST00000615531 5998 ntBASIC15.56■□□□□ 0.08
LRRC28Q86X40 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 AL671277.2-201ENST00000458060 996 ntBASIC15.56■□□□□ 0.08
LRRC28Q86X40 RASA4DP-201ENST00000460726 1199 ntBASIC15.56■□□□□ 0.08
LRRC28Q86X40 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 AC104390.1-201ENST00000555663 520 ntBASIC15.56■□□□□ 0.08
LRRC28Q86X40 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LRRC28Q86X40 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRRC28Q86X40 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 AC112907.2-201ENST00000448639 330 ntBASIC15.55■□□□□ 0.08
LRRC28Q86X40 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 AL603756.1-201ENST00000606511 2163 ntBASIC15.55■□□□□ 0.08
LRRC28Q86X40 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.55■□□□□ 0.08
LRRC28Q86X40 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRRC28Q86X40 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 AL121956.5-201ENST00000625261 221 ntBASIC15.54■□□□□ 0.08
LRRC28Q86X40 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 AC100803.2-201ENST00000562459 1963 ntBASIC15.54■□□□□ 0.08
LRRC28Q86X40 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC28Q86X40 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC28Q86X40 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms