Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 MIR574-201ENST00000385209 96 ntBASIC20.69■□□□□ 0.9
CTR9Q6PD62 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 RNA5SP415-201ENST00000517246 115 ntBASIC20.69■□□□□ 0.9
CTR9Q6PD62 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 AC134043.2-201ENST00000624206 2238 ntBASIC20.69■□□□□ 0.9
CTR9Q6PD62 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
CTR9Q6PD62 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTR9Q6PD62 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 LYSMD4-203ENST00000378904 2122 ntBASIC20.68■□□□□ 0.9
CTR9Q6PD62 AC133963.1-201ENST00000504166 1679 ntBASIC20.68■□□□□ 0.9
CTR9Q6PD62 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 AC145285.3-201ENST00000564603 959 ntBASIC20.68■□□□□ 0.9
CTR9Q6PD62 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTR9Q6PD62 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CTR9Q6PD62 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 AL135999.2-201ENST00000622438 1686 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 AC018470.1-201ENST00000624790 3129 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 ELK2BP-201ENST00000415014 1224 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 LINC00982-205ENST00000420957 435 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 UNC93B6-202ENST00000528242 690 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 AL139424.1-201ENST00000607572 797 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTR9Q6PD62 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 AC104109.2-201ENST00000602919 1418 ntBASIC20.67■□□□□ 0.9
CTR9Q6PD62 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.67■□□□□ 0.9
CTR9Q6PD62 NOC2LP2-201ENST00000407594 1944 ntBASIC20.66■□□□□ 0.9
CTR9Q6PD62 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 FZD10-202ENST00000539839 3282 ntBASIC20.66■□□□□ 0.9
CTR9Q6PD62 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 AC136632.2-201ENST00000512891 861 ntBASIC20.66■□□□□ 0.9
CTR9Q6PD62 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 AC034105.1-201ENST00000563488 319 ntBASIC20.66■□□□□ 0.9
CTR9Q6PD62 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.66■□□□□ 0.9
CTR9Q6PD62 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTR9Q6PD62 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms