Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00242Q5T6M2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 RNF216P1-203ENST00000404404 2427 ntBASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
LINC00242Q5T6M2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 SLC25A1P3-201ENST00000395415 828 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AP000523.1-201ENST00000398242 1049 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 GCSHP5-201ENST00000443090 522 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AC098590.1-201ENST00000468126 897 ntBASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
LINC00242Q5T6M2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms