Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 AC023141.5-201ENST00000458585 616 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 AC112191.1-201ENST00000523689 701 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 AC107918.2-201ENST00000530817 355 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 AC004449.1-201ENST00000564240 433 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 AC093512.1-201ENST00000617969 520 ntBASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM71Q2Q1W2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM71Q2Q1W2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM71Q2Q1W2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM71Q2Q1W2 AC090164.3-201ENST00000610780 2143 ntBASIC18.89■□□□□ 0.62
TRIM71Q2Q1W2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 BCRP1-201ENST00000444246 691 ntBASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 AC129492.6-201ENST00000611383 1305 ntBASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM71Q2Q1W2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 AC011467.4-201ENST00000594891 528 ntBASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM71Q2Q1W2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 AL355306.1-201ENST00000415580 579 ntBASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 AL096865.1-201ENST00000606796 927 ntBASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 LINC00628-201ENST00000628516 1289 ntBASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM71Q2Q1W2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms