Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PRAMEP78395 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PRAMEP78395 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 FER1L4-210ENST00000615531 5998 ntBASIC17.61■□□□□ 0.41
PRAMEP78395 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRAMEP78395 SIRPAP1-201ENST00000448467 1770 ntBASIC17.61■□□□□ 0.41
PRAMEP78395 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PRAMEP78395 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PRAMEP78395 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEP78395 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEP78395 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRAMEP78395 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEP78395 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PRAMEP78395 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PRAMEP78395 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEP78395 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.6■□□□□ 0.41
PRAMEP78395 IGHV3-52-201ENST00000519770 353 ntBASIC17.6■□□□□ 0.41
PRAMEP78395 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEP78395 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PRAMEP78395 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.6■□□□□ 0.41
PRAMEP78395 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.6■□□□□ 0.41
PRAMEP78395 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
PRAMEP78395 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRAMEP78395 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 ARMC10P1-201ENST00000313754 855 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PRAMEP78395 MYCLP1-201ENST00000372451 1075 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.59■□□□□ 0.41
PRAMEP78395 FAM220CP-201ENST00000395253 831 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.59■□□□□ 0.41
PRAMEP78395 AC009533.2-201ENST00000543664 586 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 Z69720.1-201ENST00000601483 472 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 AL139327.4-201ENST00000612362 153 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 AL358472.4-201ENST00000633140 710 ntBASIC17.59■□□□□ 0.41
PRAMEP78395 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRAMEP78395 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.59■□□□□ 0.41
PRAMEP78395 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.59■□□□□ 0.41
PRAMEP78395 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms