Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 KRT18P55-202ENST00000578578 1546 ntBASIC20.59■□□□□ 0.89
CNTNAP1P78357 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNTNAP1P78357 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.59■□□□□ 0.89
CNTNAP1P78357 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 CU639417.3-201ENST00000624240 1404 ntBASIC20.58■□□□□ 0.89
CNTNAP1P78357 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNTNAP1P78357 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 FAM58DP-201ENST00000428076 619 ntBASIC20.58■□□□□ 0.88
CNTNAP1P78357 GPS2P2-201ENST00000430745 888 ntBASIC20.58■□□□□ 0.88
CNTNAP1P78357 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNTNAP1P78357 ACTL9-202ENST00000612068 1252 ntBASIC20.58■□□□□ 0.88
CNTNAP1P78357 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.58■□□□□ 0.88
CNTNAP1P78357 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CNTNAP1P78357 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 SPDYE11-202ENST00000450699 704 ntBASIC20.57■□□□□ 0.88
CNTNAP1P78357 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 SPDYE9P-201ENST00000570642 692 ntBASIC20.57■□□□□ 0.88
CNTNAP1P78357 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNTNAP1P78357 SPDYE10P-202ENST00000612005 668 ntBASIC20.57■□□□□ 0.88
CNTNAP1P78357 SPDYE8P-202ENST00000612377 668 ntBASIC20.57■□□□□ 0.88
CNTNAP1P78357 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CNTNAP1P78357 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 REXO1L11P-201ENST00000620964 1927 ntBASIC20.56■□□□□ 0.88
CNTNAP1P78357 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNTNAP1P78357 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CNTNAP1P78357 AL592309.1-201ENST00000443127 649 ntBASIC20.56■□□□□ 0.88
CNTNAP1P78357 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms