Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.1■□□□□ 0.17
SMIM11AP58511 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.1■□□□□ 0.17
SMIM11AP58511 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SMIM11AP58511 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMIM11AP58511 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SMIM11AP58511 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.09■□□□□ 0.17
SMIM11AP58511 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 AC093525.9-201ENST00000624961 1746 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 IGHGP-201ENST00000390555 1178 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 COX5BP2-201ENST00000392354 334 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 TSPY15P-201ENST00000457163 923 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 ZNF444P1-201ENST00000559497 298 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.09■□□□□ 0.17
SMIM11AP58511 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.09■□□□□ 0.17
SMIM11AP58511 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMIM11AP58511 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.09■□□□□ 0.17
SMIM11AP58511 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 AL353692.3-201ENST00000407031 1396 ntBASIC16.09■□□□□ 0.17
SMIM11AP58511 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMIM11AP58511 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.09■□□□□ 0.17
SMIM11AP58511 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMIM11AP58511 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM11AP58511 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.08■□□□□ 0.17
SMIM11AP58511 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.08■□□□□ 0.17
SMIM11AP58511 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMIM11AP58511 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.08■□□□□ 0.16
SMIM11AP58511 AGGF1P2-201ENST00000426656 2106 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 AC068472.1-201ENST00000474589 881 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 IGHV3-52-201ENST00000519770 353 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SMIM11AP58511 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMIM11AP58511 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.08■□□□□ 0.16
SMIM11AP58511 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SMIM11AP58511 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 AL023973.1-201ENST00000624619 620 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 TMEM191A-211ENST00000637163 1067 ntBASIC16.08■□□□□ 0.16
SMIM11AP58511 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.08■□□□□ 0.16
SMIM11AP58511 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms