Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VSX2P58304 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VSX2P58304 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VSX2P58304 AC134043.2-201ENST00000624206 2238 ntBASIC16.72■□□□□ 0.27
VSX2P58304 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSX2P58304 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.71■□□□□ 0.27
VSX2P58304 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VSX2P58304 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
VSX2P58304 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 MYCLP1-201ENST00000372451 1075 ntBASIC16.71■□□□□ 0.27
VSX2P58304 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 AL020989.1-201ENST00000422979 469 ntBASIC16.71■□□□□ 0.27
VSX2P58304 AC079776.4-201ENST00000511039 504 ntBASIC16.71■□□□□ 0.27
VSX2P58304 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 STK25P1-201ENST00000585406 838 ntBASIC16.71■□□□□ 0.27
VSX2P58304 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.71■□□□□ 0.27
VSX2P58304 MTDHP4-201ENST00000600287 670 ntBASIC16.71■□□□□ 0.27
VSX2P58304 AL773604.1-201ENST00000617417 272 ntBASIC16.71■□□□□ 0.27
VSX2P58304 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
VSX2P58304 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
VSX2P58304 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.71■□□□□ 0.27
VSX2P58304 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSX2P58304 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
VSX2P58304 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
VSX2P58304 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.71■□□□□ 0.26
VSX2P58304 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
VSX2P58304 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 LINC00304-203ENST00000565008 1864 ntBASIC16.7■□□□□ 0.26
VSX2P58304 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.7■□□□□ 0.26
VSX2P58304 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.7■□□□□ 0.26
VSX2P58304 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.7■□□□□ 0.26
VSX2P58304 AC073592.4-201ENST00000623827 446 ntBASIC16.7■□□□□ 0.26
VSX2P58304 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
VSX2P58304 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 AC148477.5-201ENST00000625164 1645 ntBASIC16.7■□□□□ 0.26
VSX2P58304 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
VSX2P58304 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
VSX2P58304 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VSX2P58304 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VSX2P58304 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
VSX2P58304 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
VSX2P58304 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
VSX2P58304 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VSX2P58304 AL031284.1-201ENST00000419297 478 ntBASIC16.69■□□□□ 0.26
VSX2P58304 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms