Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC009533.2-201ENST00000543664 586 ntBASIC19.18■□□□□ 0.66
PMS1P54277 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.18■□□□□ 0.66
PMS1P54277 BNIP3P18-201ENST00000593976 575 ntBASIC19.18■□□□□ 0.66
PMS1P54277 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.18■□□□□ 0.66
PMS1P54277 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PMS1P54277 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PMS1P54277 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PMS1P54277 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
PMS1P54277 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PMS1P54277 AC105020.1-201ENST00000435356 2205 ntBASIC19.17■□□□□ 0.66
PMS1P54277 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
PMS1P54277 TOB2P1-201ENST00000469761 992 ntBASIC19.17■□□□□ 0.66
PMS1P54277 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.17■□□□□ 0.66
PMS1P54277 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 AD001527.2-201ENST00000622994 785 ntBASIC19.17■□□□□ 0.66
PMS1P54277 AL590326.2-201ENST00000625139 305 ntBASIC19.17■□□□□ 0.66
PMS1P54277 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 FLJ38576-201ENST00000623820 2459 ntBASIC19.17■□□□□ 0.66
PMS1P54277 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.17■□□□□ 0.66
PMS1P54277 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PMS1P54277 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.17■□□□□ 0.66
PMS1P54277 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PMS1P54277 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PMS1P54277 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.16■□□□□ 0.66
PMS1P54277 IGHV3-47-201ENST00000425060 335 ntBASIC19.16■□□□□ 0.66
PMS1P54277 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.16■□□□□ 0.66
PMS1P54277 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PMS1P54277 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PMS1P54277 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PMS1P54277 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.15■□□□□ 0.66
PMS1P54277 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PMS1P54277 AL135999.2-201ENST00000622438 1686 ntBASIC19.15■□□□□ 0.66
PMS1P54277 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms