Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CLCN4P51793 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN4P51793 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CLCN4P51793 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
CLCN4P51793 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN4P51793 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN4P51793 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCN4P51793 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN4P51793 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN4P51793 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN4P51793 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.26■□□□□ 0.51
CLCN4P51793 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.26■□□□□ 0.51
CLCN4P51793 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 AC004835.2-201ENST00000603762 682 ntBASIC18.26■□□□□ 0.51
CLCN4P51793 AC105339.1-204ENST00000636249 355 ntBASIC18.26■□□□□ 0.51
CLCN4P51793 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CLCN4P51793 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CLCN4P51793 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN4P51793 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLCN4P51793 AC138932.1-201ENST00000534164 6830 ntBASIC18.26■□□□□ 0.51
CLCN4P51793 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CLCN4P51793 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 FAM185BP-201ENST00000443595 716 ntBASIC18.25■□□□□ 0.51
CLCN4P51793 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCN4P51793 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.25■□□□□ 0.51
CLCN4P51793 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.25■□□□□ 0.51
CLCN4P51793 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN4P51793 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN4P51793 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN4P51793 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN4P51793 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLCN4P51793 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN4P51793 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN4P51793 AC004461.1-201ENST00000412461 403 ntBASIC18.24■□□□□ 0.51
CLCN4P51793 FAM8A3P-201ENST00000427218 844 ntBASIC18.24■□□□□ 0.51
CLCN4P51793 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN4P51793 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms