Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCN3P51790 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN3P51790 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN3P51790 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN3P51790 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLCN3P51790 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 NOC2LP1-202ENST00000452600 2235 ntBASIC19.11■□□□□ 0.65
CLCN3P51790 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 IGLL3P-201ENST00000412472 434 ntBASIC19.11■□□□□ 0.65
CLCN3P51790 SLC25A6P5-201ENST00000435663 894 ntBASIC19.11■□□□□ 0.65
CLCN3P51790 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CLCN3P51790 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN3P51790 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN3P51790 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN3P51790 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 BCL2-203ENST00000589955 5011 ntBASIC19.11■□□□□ 0.65
CLCN3P51790 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN3P51790 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN3P51790 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN3P51790 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 AC008764.6-201ENST00000595909 2069 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 HTR7P1-202ENST00000624664 4411 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN3P51790 MRPL20P1-201ENST00000400819 433 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 PRSS29P-201ENST00000440800 595 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN3P51790 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN3P51790 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN3P51790 AC002347.1-201ENST00000569543 541 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 OR7E47P-204ENST00000575924 449 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 PI4KAP1-204ENST00000612579 1703 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN3P51790 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN3P51790 AC007613.1-201ENST00000572811 2597 ntBASIC19.1■□□□□ 0.65
CLCN3P51790 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCN3P51790 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN3P51790 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN3P51790 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLCN3P51790 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLCN3P51790 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN3P51790 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN3P51790 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLCN3P51790 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLCN3P51790 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN3P51790 RPSAP43-201ENST00000402237 625 ntBASIC19.09■□□□□ 0.65
CLCN3P51790 UPF3AP3-201ENST00000420996 769 ntBASIC19.09■□□□□ 0.65
CLCN3P51790 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN3P51790 AC004832.2-201ENST00000426397 482 ntBASIC19.09■□□□□ 0.65
CLCN3P51790 GPX1P2-201ENST00000429271 606 ntBASIC19.09■□□□□ 0.65
CLCN3P51790 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN3P51790 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN3P51790 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN3P51790 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN3P51790 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.09■□□□□ 0.65
CLCN3P51790 AC010654.1-201ENST00000615722 808 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms