Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.16■□□□□ 0.5
MMP13P45452 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MMP13P45452 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MMP13P45452 LINC00304-203ENST00000565008 1864 ntBASIC18.16■□□□□ 0.5
MMP13P45452 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MMP13P45452 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP13P45452 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.15■□□□□ 0.5
MMP13P45452 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 AC246785.2-201ENST00000432512 513 ntBASIC18.15■□□□□ 0.5
MMP13P45452 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 TPSP2-201ENST00000561760 610 ntBASIC18.15■□□□□ 0.5
MMP13P45452 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MMP13P45452 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MMP13P45452 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
MMP13P45452 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MMP13P45452 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
MMP13P45452 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 PCDHA14-201ENST00000506751 2298 ntBASIC18.14■□□□□ 0.49
MMP13P45452 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP13P45452 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
MMP13P45452 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 ATP5G2P1-201ENST00000433580 426 ntBASIC18.14■□□□□ 0.49
MMP13P45452 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.14■□□□□ 0.49
MMP13P45452 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.14■□□□□ 0.49
MMP13P45452 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.14■□□□□ 0.49
MMP13P45452 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.14■□□□□ 0.49
MMP13P45452 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MMP13P45452 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MMP13P45452 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.14■□□□□ 0.49
MMP13P45452 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.13■□□□□ 0.49
MMP13P45452 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MMP13P45452 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
MMP13P45452 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.13■□□□□ 0.49
MMP13P45452 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
MMP13P45452 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MMP13P45452 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms