Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRPHP41219 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PRPHP41219 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PRPHP41219 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPHP41219 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.69■□□□□ 0.74
PRPHP41219 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPHP41219 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPHP41219 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPHP41219 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPHP41219 TSPY19P-201ENST00000418461 509 ntBASIC19.69■□□□□ 0.74
PRPHP41219 TSPY18P-201ENST00000441642 509 ntBASIC19.69■□□□□ 0.74
PRPHP41219 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPHP41219 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.69■□□□□ 0.74
PRPHP41219 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRPHP41219 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPHP41219 AL121772.3-201ENST00000610840 674 ntBASIC19.69■□□□□ 0.74
PRPHP41219 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.69■□□□□ 0.74
PRPHP41219 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.69■□□□□ 0.74
PRPHP41219 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPHP41219 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRPHP41219 PKD1P1-201ENST00000458669 6805 ntBASIC19.69■□□□□ 0.74
PRPHP41219 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
PRPHP41219 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 AL020989.1-201ENST00000422979 469 ntBASIC19.68■□□□□ 0.74
PRPHP41219 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.68■□□□□ 0.74
PRPHP41219 AC106795.1-205ENST00000512851 1056 ntBASIC19.68■□□□□ 0.74
PRPHP41219 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRPHP41219 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 AL135999.2-201ENST00000622438 1686 ntBASIC19.68■□□□□ 0.74
PRPHP41219 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
PRPHP41219 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 AP005117.1-201ENST00000584346 1413 ntBASIC19.68■□□□□ 0.74
PRPHP41219 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRPHP41219 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.68■□□□□ 0.74
PRPHP41219 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 AP001094.4-201ENST00000579008 2176 ntBASIC19.67■□□□□ 0.74
PRPHP41219 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 AC079776.2-201ENST00000641154 1609 ntBASIC19.67■□□□□ 0.74
PRPHP41219 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRPHP41219 AC132008.2-207ENST00000454517 770 ntBASIC19.67■□□□□ 0.74
PRPHP41219 KRT18P31-201ENST00000506277 1292 ntBASIC19.67■□□□□ 0.74
PRPHP41219 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.67■□□□□ 0.74
PRPHP41219 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.67■□□□□ 0.74
PRPHP41219 AP001269.4-201ENST00000609611 512 ntBASIC19.67■□□□□ 0.74
PRPHP41219 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.67■□□□□ 0.74
PRPHP41219 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PRPHP41219 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.67■□□□□ 0.74
PRPHP41219 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRPHP41219 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPHP41219 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPHP41219 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPHP41219 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.66■□□□□ 0.74
PRPHP41219 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPHP41219 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPHP41219 AC093525.9-201ENST00000624961 1746 ntBASIC19.66■□□□□ 0.74
PRPHP41219 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
PRPHP41219 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRPHP41219 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.66■□□□□ 0.74
PRPHP41219 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRPHP41219 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms